WormBase Tree Display for Variation: WBVar00183168

WBVar00183168 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00183168
    Other_name: haw50444
      haw148433
      cewivar00200447
      Y55F3AL.1c.1:c.4368+265G>A
      Y55F3AL.1b.1:c.4935+265G>A
      Y55F3AL.1a.1:c.4902+298G>A
      Y55F3AL.1f.1:c.2622+265G>A
      Y55F3AL.1e.1:c.2589+298G>A
      Y55F3AL.1d.1:c.4335+298G>A
    HGVSg: CHROMOSOME_IV:g.981077G>A
  Sequence_details: SMap: S_parent: Sequence: Y55F3AM
    Flanking_sequences: tttcgtggtgggcaaagtaggtcat attatacttattttaaagctctcgt
    Mapping_target: Y55F3AM
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022856 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022887 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022899 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00568298
    Status: Live
  Affects: Gene: WBGene00004047
    Transcript: Y55F3AL.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1e.1:c.2589+298G>A
        Intron_number: 9/11
      Y55F3AL.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1d.1:c.4335+298G>A
        Intron_number: 18/20
      Y55F3AL.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1f.1:c.2622+265G>A
        Intron_number: 9/11
      Y55F3AL.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1b.1:c.4935+265G>A
        Intron_number: 21/24
      Y55F3AL.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1a.1:c.4902+298G>A
        Intron_number: 21/24
      Y55F3AL.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3AL.1c.1:c.4368+265G>A
        Intron_number: 18/20
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw50444
  Method: WGS_Hawaiian_Waterston