WormBase Tree Display for Variation: WBVar00183179
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| WBVar00183179 | Name | Public_name | WBVar00183179 | ||
|---|---|---|---|---|---|
| Other_name | haw50455 | ||||
| cewivar00200449 | |||||
| Y55F3AL.1f.1:c.3057-250C>T | |||||
| Y55F3AL.1b.1:c.5370-250C>T | |||||
| Y55F3AL.1a.1:c.5337-250C>T | |||||
| Y55F3AL.1e.1:c.3024-250C>T | |||||
| Y55F3AL.1d.1:c.4770-250C>T | |||||
| Y55F3AL.1c.1:c.4803-250C>T | |||||
| HGVSg | CHROMOSOME_IV:g.982479C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y55F3AM | |
| Flanking_sequences | acaacaaaaaataacattcggctca | cgaaatttaagtatattcatgacct | |||
| Mapping_target | Y55F3AM | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004047 | |||
| Transcript | Y55F3AL.1e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AL.1e.1:c.3024-250C>T | ||||
| Intron_number | 10/11 | ||||
| Y55F3AL.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AL.1d.1:c.4770-250C>T | ||||
| Intron_number | 19/20 | ||||
| Y55F3AL.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AL.1f.1:c.3057-250C>T | ||||
| Intron_number | 10/11 | ||||
| Y55F3AL.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AL.1b.1:c.5370-250C>T | ||||
| Intron_number | 22/24 | ||||
| Y55F3AL.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AL.1a.1:c.5337-250C>T | ||||
| Intron_number | 22/24 | ||||
| Y55F3AL.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y55F3AL.1c.1:c.4803-250C>T | ||||
| Intron_number | 19/20 | ||||
| Remark | [20081124 db] this Variation was previously named hw50455 | ||||
| Method | WGS_Hawaiian_Waterston |
