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WormBase Tree Display for Variation: WBVar00183250

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Name Class

WBVar00183250NamePublic_nameWBVar00183250
Other_namehaw50526
Y55F3AM.3c.3:c.-127-93T>A
Y55F3AM.3c.4:c.-127-93T>A
Y55F3AM.3c.1:c.-127-93T>A
Y55F3AM.3a.1:c.309-93T>A
Y55F3AM.3c.2:c.-220T>A
HGVSgCHROMOSOME_IV:g.1014144T>A
Sequence_detailsSMapS_parentSequenceY55F3AM
Flanking_sequencesttactcaatttttcgggaaatatcctttttttttcattaaaaaatggggt
Mapping_targetY55F3AM
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00021921
TranscriptY55F3AM.3c.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.2:c.-220T>A
cDNA_position1397
Exon_number2/7
Y55F3AM.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.1:c.-127-93T>A
Intron_number4/9
Y55F3AM.3c.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.4:c.-127-93T>A
Intron_number2/7
Y55F3AM.3c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.3:c.-127-93T>A
Intron_number2/7
Y55F3AM.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3a.1:c.309-93T>A
Intron_number4/8
Remark[20081124 db] this Variation was previously named hw50526
MethodWGS_Hawaiian_Waterston