WormBase Tree Display for Variation: WBVar00183260
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WBVar00183260 | Name | Public_name | WBVar00183260 | ||
---|---|---|---|---|---|
Other_name | haw50536 | ||||
cewivar00030638 | |||||
Y55F3AM.3c.3:c.1209+38A>T | |||||
Y55F3AM.3c.1:c.1209+38A>T | |||||
Y55F3AM.3c.2:c.1209+38A>T | |||||
Y55F3AM.3a.1:c.1644+38A>T | |||||
Y55F3AM.3c.4:c.1209+38A>T | |||||
HGVSg | CHROMOSOME_IV:g.1017760A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3AM | |
Flanking_sequences | tgaatattcgggcaaatgggttttt | aaaaaattcgaaatataaaaaaaaa | |||
Mapping_target | Y55F3AM | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (15) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021921 | |||
Transcript | Y55F3AM.3c.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.3c.2:c.1209+38A>T | ||||
Intron_number | 5/6 | ||||
Y55F3AM.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.3c.1:c.1209+38A>T | ||||
Intron_number | 8/9 | ||||
Y55F3AM.3c.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.3c.4:c.1209+38A>T | ||||
Intron_number | 6/7 | ||||
Y55F3AM.3c.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.3c.3:c.1209+38A>T | ||||
Intron_number | 6/7 | ||||
Y55F3AM.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AM.3a.1:c.1644+38A>T | ||||
Intron_number | 7/8 | ||||
Remark | [20081124 db] this Variation was previously named hw50536 | ||||
Method | WGS_Hawaiian_Waterston |