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WormBase Tree Display for Variation: WBVar00183260

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Name Class

WBVar00183260NamePublic_nameWBVar00183260
Other_namehaw50536
cewivar00030638
Y55F3AM.3c.3:c.1209+38A>T
Y55F3AM.3c.1:c.1209+38A>T
Y55F3AM.3c.2:c.1209+38A>T
Y55F3AM.3a.1:c.1644+38A>T
Y55F3AM.3c.4:c.1209+38A>T
HGVSgCHROMOSOME_IV:g.1017760A>T
Sequence_detailsSMapS_parentSequenceY55F3AM
Flanking_sequencestgaatattcgggcaaatgggtttttaaaaaattcgaaatataaaaaaaaa
Mapping_targetY55F3AM
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021921
TranscriptY55F3AM.3c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.2:c.1209+38A>T
Intron_number5/6
Y55F3AM.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.1:c.1209+38A>T
Intron_number8/9
Y55F3AM.3c.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.4:c.1209+38A>T
Intron_number6/7
Y55F3AM.3c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3c.3:c.1209+38A>T
Intron_number6/7
Y55F3AM.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3AM.3a.1:c.1644+38A>T
Intron_number7/8
Remark[20081124 db] this Variation was previously named hw50536
MethodWGS_Hawaiian_Waterston