WormBase Tree Display for Variation: WBVar00183471
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WBVar00183471 | Name | Public_name | WBVar00183471 | ||
---|---|---|---|---|---|
Other_name | haw50747 | ||||
cewivar00030961 | |||||
Y55F3AR.3b.1:c.505-543A>G | |||||
Y55F3AR.3a.1:c.868-543A>G | |||||
HGVSg | CHROMOSOME_IV:g.1090658T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3AR | |
Flanking_sequences | ttttttggtgccagaaaattcgatt | caagctgaaaattgacatttttcag | |||
Mapping_target | Y55F3AR | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021934 | |||
Transcript | Y55F3AR.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AR.3b.1:c.505-543A>G | ||||
Intron_number | 1/3 | ||||
Y55F3AR.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3AR.3a.1:c.868-543A>G | ||||
Intron_number | 5/8 | ||||
Remark | [20081124 db] this Variation was previously named hw50747 | ||||
Method | WGS_Hawaiian_Waterston |