WormBase Tree Display for Variation: WBVar00183624

WBVar00183624 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00183624
    Other_name: haw50900
      haw148740
      cewivar00031732
      F53H1.1d.1:c.1785+1188T>G
      F53H1.1a.1:c.2197-14T>G
      F53H1.1c.1:c.1786-14T>G
      F53H1.1b.1:c.2196+1188T>G
    HGVSg: CHROMOSOME_IV:g.1299368A>C
  Sequence_details: SMap: S_parent: Sequence: F53H1
    Flanking_sequences: cattccgtgaacctggaaatttgaa aaaattaagtttttagcctaaaaat
    Mapping_target: F53H1
    Type_of_mutation: Substitution: A C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (21)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00568605
    Status: Live
  Affects: Gene: WBGene00018776
    Transcript: F53H1.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53H1.1b.1:c.2196+1188T>G
        Intron_number: 8/9
      F53H1.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53H1.1d.1:c.1785+1188T>G
        Intron_number: 7/7
      F53H1.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53H1.1c.1:c.1786-14T>G
        Intron_number: 7/9
      F53H1.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53H1.1a.1:c.2197-14T>G
        Intron_number: 9/12
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw50900
  Method: WGS_Hawaiian_Waterston