WormBase Tree Display for Variation: WBVar00183628
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WBVar00183628 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00183628 | |||
Other_name | haw50904 | ||||
haw148745 | |||||
cewivar00200835 | |||||
F53H1.1d.1:c.1408-412G>T | |||||
F53H1.1c.1:c.1408-412G>T | |||||
F53H1.1a.1:c.1819-412G>T | |||||
F53H1.1b.1:c.1819-412G>T | |||||
HGVSg | CHROMOSOME_IV:g.1302506C>A | ||||
Sequence_details | SMap | S_parent | Sequence | F53H1 | |
Flanking_sequences | tttaagctgaaaattactaaaataa | ctttatttttaaacgaaaatttcaa | |||
Mapping_target | F53H1 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00568610 | |||
Status | Live | ||||
Affects | Gene | WBGene00018776 | |||
Transcript | F53H1.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1b.1:c.1819-412G>T | ||||
Intron_number | 6/9 | ||||
F53H1.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1d.1:c.1408-412G>T | ||||
Intron_number | 5/7 | ||||
F53H1.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1c.1:c.1408-412G>T | ||||
Intron_number | 5/9 | ||||
F53H1.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1a.1:c.1819-412G>T | ||||
Intron_number | 7/12 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw50904 | ||||
Method | WGS_Hawaiian_Waterston |