WormBase Tree Display for Variation: WBVar00183641
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WBVar00183641 | Name | Public_name | WBVar00183641 | ||
---|---|---|---|---|---|
Other_name | haw50917 | ||||
cewivar00378955 | |||||
F53H1.1d.1:c.810+924A>T | |||||
F53H1.1c.1:c.810+924A>T | |||||
F53H1.1b.1:c.811-621A>T | |||||
F53H1.1a.1:c.811-621A>T | |||||
HGVSg | CHROMOSOME_IV:g.1306985T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F53H1 | |
Flanking_sequences | tctaattttcagcaggattttgatt | aaaaaattagaacaatccaagaaac | |||
Mapping_target | F53H1 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00018776 | |||
Transcript | F53H1.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1b.1:c.811-621A>T | ||||
Intron_number | 2/9 | ||||
F53H1.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1d.1:c.810+924A>T | ||||
Intron_number | 2/7 | ||||
F53H1.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1c.1:c.810+924A>T | ||||
Intron_number | 2/9 | ||||
F53H1.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53H1.1a.1:c.811-621A>T | ||||
Intron_number | 3/12 | ||||
Remark | [20081124 db] this Variation was previously named hw50917 | ||||
Method | WGS_Hawaiian_Waterston |