WormBase Tree Display for Variation: WBVar00183708
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WBVar00183708 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00183708 | |||
Other_name | uCE4-537 | ||||
haw50984 | |||||
cewivar00031807 | |||||
F53H1.3a.1:c.1123-5G>T | |||||
HGVSg | CHROMOSOME_IV:g.1335369G>T | ||||
Sequence_details | SMap | S_parent | Sequence | F53H1 | |
Flanking_sequences | ctactgtacttaaaactgaaaattt | ccaggttcaacacaatattctacag | |||
Mapping_target | F53H1 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00270253 | |||
Status | Live | ||||
Affects | Gene | WBGene00018777 | |||
Transcript | F53H1.3a.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | F53H1.3a.1:c.1123-5G>T | ||||
Intron_number | 9/13 | ||||
Reference | WBPaper00005369 | ||||
Remark | [20081124 db] this Variation was previously named hw50984 | ||||
Method | WGS_Hawaiian_Waterston |