WormBase Tree Display for Variation: WBVar00184168
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WBVar00184168 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00184168 | |||
Other_name | haw51444 | ||||
haw149104 | |||||
cewivar00201358 | |||||
Y41D4B.12b.1:c.345-187C>T | |||||
Y41D4B.12a.2:c.600-187C>T | |||||
Y41D4B.12a.1:c.600-187C>T | |||||
HGVSg | CHROMOSOME_IV:g.1605186C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y41D4B | |
Flanking_sequences | tttttgacgtattttacgaaatttt | agaaaaaaaccaaagaaaatcatgt | |||
Mapping_target | Y41D4B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00568969 | |||
Status | Live | ||||
Affects | Gene | WBGene00021515 | |||
Transcript | Y41D4B.12b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4B.12b.1:c.345-187C>T | ||||
Intron_number | 3/5 | ||||
Y41D4B.12a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4B.12a.1:c.600-187C>T | ||||
Intron_number | 2/4 | ||||
Y41D4B.12a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4B.12a.2:c.600-187C>T | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw51444 | ||||
Method | WGS_Hawaiian_Waterston |