WormBase Tree Display for Variation: WBVar00184253
expand all nodes | collapse all nodes | view schema
WBVar00184253 | Name | Public_name | WBVar00184253 | ||
---|---|---|---|---|---|
Other_name | haw51529 | ||||
cewivar00201478 | |||||
Y41D4B.21c.1:c.248-23T>A | |||||
Y41D4B.21b.1:c.-53-23T>A | |||||
Y41D4B.21a.1:c.248-23T>A | |||||
HGVSg | CHROMOSOME_IV:g.1644227A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y41D4B | |
Flanking_sequences | attctggaaaaattggattttaggt | ttttttgggggttttaacgaaaatt | |||
Mapping_target | Y41D4B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021522 | |||
Transcript | Y41D4B.21b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4B.21b.1:c.-53-23T>A | ||||
Intron_number | 1/7 | ||||
Y41D4B.21c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4B.21c.1:c.248-23T>A | ||||
Intron_number | 1/5 | ||||
Y41D4B.21a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41D4B.21a.1:c.248-23T>A | ||||
Intron_number | 2/7 | ||||
Remark | [20081124 db] this Variation was previously named hw51529 | ||||
Method | WGS_Hawaiian_Waterston |