WormBase Tree Display for Variation: WBVar00184543
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WBVar00184543 | Name | Public_name | WBVar00184543 | ||
---|---|---|---|---|---|
Other_name | haw51819 | ||||
cewivar00543890 | |||||
Y38C1BA.2b.1:c.201-2343A>G | |||||
Y38C1BA.2a.3:c.-20+250A>G | |||||
Y38C1BA.2a.2:c.-19-2343A>G | |||||
Y38C1BA.2a.1:c.-19-2343A>G | |||||
HGVSg | CHROMOSOME_IV:g.1810855T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y38C1BA | |
Flanking_sequences | gaaatatttttaatttcattttttt | ctcaaaattaaaatatctcaaacga | |||
Mapping_target | Y38C1BA | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004913 | |||
Transcript | Y38C1BA.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y38C1BA.2a.1:c.-19-2343A>G | ||||
Intron_number | 2/8 | ||||
Y38C1BA.2a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38C1BA.2a.3:c.-20+250A>G | ||||
Intron_number | 1/7 | ||||
Y38C1BA.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38C1BA.2b.1:c.201-2343A>G | ||||
Intron_number | 3/7 | ||||
Y38C1BA.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38C1BA.2a.2:c.-19-2343A>G | ||||
Intron_number | 1/7 | ||||
Remark | [20081124 db] this Variation was previously named hw51819 | ||||
Method | WGS_Hawaiian_Waterston |