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WormBase Tree Display for Variation: WBVar00184609

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Name Class

WBVar00184609NamePublic_nameWBVar00184609
Other_namehaw51885
cewivar00201906
F55A8.2h.1:c.727+102T>A
F55A8.2a.2:c.727+102T>A
F55A8.2e.1:c.616+102T>A
F55A8.2b.1:c.598+102T>A
F55A8.2c.1:c.634+102T>A
F55A8.2a.1:c.727+102T>A
HGVSgCHROMOSOME_IV:g.1864388T>A
Sequence_detailsSMapS_parentSequenceF55A8
Flanking_sequencesgccgtggaaaattgattgaaaattgctaaaatcagcaaaaatttctagta
Mapping_targetF55A8
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001173
TranscriptF55A8.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2b.1:c.598+102T>A
Intron_number4/9
F55A8.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2e.1:c.616+102T>A
Intron_number5/11
F55A8.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2c.1:c.634+102T>A
Intron_number4/10
F55A8.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2h.1:c.727+102T>A
Intron_number4/10
F55A8.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2a.2:c.727+102T>A
Intron_number4/11
F55A8.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF55A8.2a.1:c.727+102T>A
Intron_number4/10
Remark[20081124 db] this Variation was previously named hw51885
MethodWGS_Hawaiian_Waterston