WormBase Tree Display for Variation: WBVar00184609
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WBVar00184609 | Name | Public_name | WBVar00184609 | ||
---|---|---|---|---|---|
Other_name | haw51885 | ||||
cewivar00201906 | |||||
F55A8.2h.1:c.727+102T>A | |||||
F55A8.2a.2:c.727+102T>A | |||||
F55A8.2e.1:c.616+102T>A | |||||
F55A8.2b.1:c.598+102T>A | |||||
F55A8.2c.1:c.634+102T>A | |||||
F55A8.2a.1:c.727+102T>A | |||||
HGVSg | CHROMOSOME_IV:g.1864388T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F55A8 | |
Flanking_sequences | gccgtggaaaattgattgaaaattg | ctaaaatcagcaaaaatttctagta | |||
Mapping_target | F55A8 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001173 | |||
Transcript | F55A8.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F55A8.2b.1:c.598+102T>A | ||||
Intron_number | 4/9 | ||||
F55A8.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55A8.2e.1:c.616+102T>A | ||||
Intron_number | 5/11 | ||||
F55A8.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55A8.2c.1:c.634+102T>A | ||||
Intron_number | 4/10 | ||||
F55A8.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55A8.2h.1:c.727+102T>A | ||||
Intron_number | 4/10 | ||||
F55A8.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55A8.2a.2:c.727+102T>A | ||||
Intron_number | 4/11 | ||||
F55A8.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55A8.2a.1:c.727+102T>A | ||||
Intron_number | 4/10 | ||||
Remark | [20081124 db] this Variation was previously named hw51885 | ||||
Method | WGS_Hawaiian_Waterston |