WormBase Tree Display for Variation: WBVar00184629
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| WBVar00184629 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00184629 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_IV:g.1873060T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F55A8 | |
| Flanking_sequences | aacttccataaattatggtttaaac | gtagatcacacaagaatcgacttca | |||
| Mapping_target | F55A8 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (17) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00569287 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00001173 | |||
| Transcript | F55A8.2g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2g.1:c.61-525T>C | ||||
| Intron_number | 1/4 | ||||
| F55A8.2e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2e.1:c.838-525T>C | ||||
| Intron_number | 7/11 | ||||
| F55A8.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2d.1:c.385-525T>C | ||||
| Intron_number | 2/3 | ||||
| F55A8.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2b.1:c.820-525T>C | ||||
| Intron_number | 6/9 | ||||
| F55A8.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2c.1:c.856-525T>C | ||||
| Intron_number | 6/10 | ||||
| F55A8.2a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2a.2:c.949-525T>C | ||||
| Intron_number | 6/11 | ||||
| F55A8.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2h.1:c.949-525T>C | ||||
| Intron_number | 6/10 | ||||
| F55A8.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55A8.2a.1:c.949-525T>C | ||||
| Intron_number | 6/10 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw51905 | ||||
| Method | WGS_Hawaiian_Waterston |
