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WormBase Tree Display for Variation: WBVar00184716

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Name Class

WBVar00184716NamePublic_nameWBVar00184716
Other_namehaw51992
cewivar00201995
F52C12.4h.1:c.4112+338G>A
F52C12.4d.1:c.4118+338G>A
F52C12.4b.1:c.4079+338G>A
F52C12.4g.1:c.4106+338G>A
F52C12.4f.1:c.4073+338G>A
F52C12.4c.1:c.4112+338G>A
F52C12.4e.1:c.4067+338G>A
F52C12.4a.1:c.4073+338G>A
HGVSgCHROMOSOME_IV:g.1945282G>A
Sequence_detailsSMapS_parentSequenceF52C12
Flanking_sequencesaacacatttctgcatttttcccgaccactaacttcaaatttgaaaattcc
Mapping_targetF52C12
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00018681
TranscriptF52C12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4d.1:c.4118+338G>A
Intron_number20/21
F52C12.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4h.1:c.4112+338G>A
Intron_number20/21
F52C12.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4g.1:c.4106+338G>A
Intron_number21/23
F52C12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4c.1:c.4112+338G>A
Intron_number20/21
F52C12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4f.1:c.4073+338G>A
Intron_number19/20
F52C12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4b.1:c.4079+338G>A
Intron_number20/22
F52C12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4a.1:c.4073+338G>A
Intron_number19/21
F52C12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4e.1:c.4067+338G>A
Intron_number20/22
Remark[20081124 db] this Variation was previously named hw51992
MethodWGS_Hawaiian_Waterston