WormBase Tree Display for Variation: WBVar00184716
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WBVar00184716 | Name | Public_name | WBVar00184716 | ||
---|---|---|---|---|---|
Other_name | haw51992 | ||||
cewivar00201995 | |||||
F52C12.4h.1:c.4112+338G>A | |||||
F52C12.4d.1:c.4118+338G>A | |||||
F52C12.4b.1:c.4079+338G>A | |||||
F52C12.4g.1:c.4106+338G>A | |||||
F52C12.4f.1:c.4073+338G>A | |||||
F52C12.4c.1:c.4112+338G>A | |||||
F52C12.4e.1:c.4067+338G>A | |||||
F52C12.4a.1:c.4073+338G>A | |||||
HGVSg | CHROMOSOME_IV:g.1945282G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F52C12 | |
Flanking_sequences | aacacatttctgcatttttcccgac | cactaacttcaaatttgaaaattcc | |||
Mapping_target | F52C12 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00018681 | |||
Transcript | F52C12.4d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4d.1:c.4118+338G>A | ||||
Intron_number | 20/21 | ||||
F52C12.4h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4h.1:c.4112+338G>A | ||||
Intron_number | 20/21 | ||||
F52C12.4g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4g.1:c.4106+338G>A | ||||
Intron_number | 21/23 | ||||
F52C12.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4c.1:c.4112+338G>A | ||||
Intron_number | 20/21 | ||||
F52C12.4f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4f.1:c.4073+338G>A | ||||
Intron_number | 19/20 | ||||
F52C12.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4b.1:c.4079+338G>A | ||||
Intron_number | 20/22 | ||||
F52C12.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4a.1:c.4073+338G>A | ||||
Intron_number | 19/21 | ||||
F52C12.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F52C12.4e.1:c.4067+338G>A | ||||
Intron_number | 20/22 | ||||
Remark | [20081124 db] this Variation was previously named hw51992 | ||||
Method | WGS_Hawaiian_Waterston |