WormBase Tree Display for Variation: WBVar00184821
expand all nodes | collapse all nodes | view schema
WBVar00184821 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00184821 | |||
Other_name | haw52097 | ||||
haw149555 | |||||
cewivar00033326 | |||||
Y76B12C.7a.1:c.3970+804A>G | |||||
Y76B12C.7c.1:c.664+804A>G | |||||
Y76B12C.7b.1:c.3397+804A>G | |||||
HGVSg | CHROMOSOME_IV:g.2012250T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y76B12C | |
Flanking_sequences | ttttaagtcagttttagatcactcg | aaaaataacattttcgcggtcgaat | |||
Mapping_target | Y76B12C | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00569420 | |||
Status | Live | ||||
Affects | Gene | WBGene00022301 | |||
Transcript | Y76B12C.7b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y76B12C.7b.1:c.3397+804A>G | ||||
Intron_number | 11/12 | ||||
Y76B12C.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76B12C.7c.1:c.664+804A>G | ||||
Intron_number | 1/2 | ||||
Y76B12C.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76B12C.7a.1:c.3970+804A>G | ||||
Intron_number | 15/17 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw52097 | ||||
Method | WGS_Hawaiian_Waterston |