WormBase Tree Display for Variation: WBVar00184822
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| WBVar00184822 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00184822 | |||
| Other_name | haw52098 | ||||
| haw149556 | |||||
| cewivar00033329 | |||||
| Y76B12C.7a.1:c.3669G>T | |||||
| CE48744:p.Ser121= | |||||
| CE48903:p.Ser1032= | |||||
| Y76B12C.7b.1:c.3096G>T | |||||
| CE29932:p.Ser1223= | |||||
| Y76B12C.7c.1:c.363G>T | |||||
| HGVSg | CHROMOSOME_IV:g.2013355C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y76B12C | |
| Flanking_sequences | cacacgcaattgcaatagttcgaag | gaatgtagttgatagacataataat | |||
| Mapping_target | Y76B12C | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00569421 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00022301 | |||
| Transcript | Y76B12C.7b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y76B12C.7b.1:c.3096G>T | ||||
| HGVSp | CE48903:p.Ser1032= | ||||
| cDNA_position | 3096 | ||||
| CDS_position | 3096 | ||||
| Protein_position | 1032 | ||||
| Exon_number | 11/13 | ||||
| Codon_change | tcG/tcT | ||||
| Amino_acid_change | S | ||||
| Y76B12C.7c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y76B12C.7c.1:c.363G>T | ||||
| HGVSp | CE48744:p.Ser121= | ||||
| cDNA_position | 363 | ||||
| CDS_position | 363 | ||||
| Protein_position | 121 | ||||
| Exon_number | 1/3 | ||||
| Codon_change | tcG/tcT | ||||
| Amino_acid_change | S | ||||
| Y76B12C.7a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y76B12C.7a.1:c.3669G>T | ||||
| HGVSp | CE29932:p.Ser1223= | ||||
| cDNA_position | 3673 | ||||
| CDS_position | 3669 | ||||
| Protein_position | 1223 | ||||
| Exon_number | 15/18 | ||||
| Codon_change | tcG/tcT | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw52098 | ||||
| Method | WGS_Hawaiian_Waterston |
