Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00185542

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00185542EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00185542
Other_namehaw52818
haw150069
cewivar00202711
Y38F2AR.12a.1:c.2190+207G>A
Y38F2AR.12b.1:c.-284+207G>A
Y38F2AR.12c.1:c.1248+207G>A
HGVSgCHROMOSOME_IV:g.2403704C>T
Sequence_detailsSMapS_parentSequenceY38F2AR
Flanking_sequencesgcctgaagctaagccttagcaaaagttaaacctaagcctaagcctaaccc
Mapping_targetY38F2AR
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00569934
StatusLive
AffectsGeneWBGene00021430
TranscriptY38F2AR.12b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38F2AR.12b.1:c.-284+207G>A
Intron_number5/12
Y38F2AR.12c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38F2AR.12c.1:c.1248+207G>A
Intron_number4/10
Y38F2AR.12a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38F2AR.12a.1:c.2190+207G>A
Intron_number8/15
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw52818
MethodWGS_Hawaiian_Waterston