WormBase Tree Display for Variation: WBVar00185799
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WBVar00185799 | Name | Public_name | WBVar00185799 | ||
---|---|---|---|---|---|
Other_name | haw53075 | ||||
cewivar00202915 | |||||
Y69A2AR.16b.1:c.160-2435C>T | |||||
Y69A2AR.22.1:c.213+66G>A | |||||
Y69A2AR.16a.1:c.733-2435C>T | |||||
HGVSg | CHROMOSOME_IV:g.2507551C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y69A2AR | |
Flanking_sequences | ggcaactgtaataaccgggaatggt | tacagtaaactaatgccggaaattg | |||
Mapping_target | Y69A2AR | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00022093 | |||
WBGene00022087 | |||||
Transcript | Y69A2AR.16b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y69A2AR.16b.1:c.160-2435C>T | ||||
Intron_number | 1/12 | ||||
Y69A2AR.22.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y69A2AR.22.1:c.213+66G>A | ||||
Intron_number | 3/5 | ||||
Y69A2AR.16a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y69A2AR.16a.1:c.733-2435C>T | ||||
Intron_number | 6/18 | ||||
Remark | [20081124 db] this Variation was previously named hw53075 | ||||
Method | WGS_Hawaiian_Waterston |