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WormBase Tree Display for Variation: WBVar00185860

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Name Class

WBVar00185860NamePublic_nameWBVar00185860
Other_namehaw53136
cewivar00202956
Y69A2AR.16b.1:c.2358+335T>C
Y69A2AR.16c.1:c.1422+335T>C
Y69A2AR.16a.1:c.2931+335T>C
Y69A2AR.16d.1:c.153+335T>C
HGVSgCHROMOSOME_IV:g.2527184T>C
Sequence_detailsSMapS_parentSequenceY69A2AR
Flanking_sequencestcgataaaactcaaccaaaaatcaaaaatttccgggaaaatcgatagaat
Mapping_targetY69A2AR
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00022087
TranscriptY69A2AR.16c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY69A2AR.16c.1:c.1422+335T>C
Intron_number6/8
Y69A2AR.16b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY69A2AR.16b.1:c.2358+335T>C
Intron_number10/12
Y69A2AR.16d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY69A2AR.16d.1:c.153+335T>C
Intron_number1/3
Y69A2AR.16a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY69A2AR.16a.1:c.2931+335T>C
Intron_number15/18
Remark[20081124 db] this Variation was previously named hw53136
MethodWGS_Hawaiian_Waterston