WormBase Tree Display for Variation: WBVar00186443
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WBVar00186443 | Name | Public_name | WBVar00186443 | ||
---|---|---|---|---|---|
Other_name | snp_Y54G2A[12] | ||||
haw53719 | |||||
haw150682 | |||||
cewivar00203411 | |||||
Y54G2A.33.2:c.214+379A>C | |||||
Y54G2A.33.1:c.214+379A>C | |||||
HGVSg | CHROMOSOME_IV:g.2843067A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | |
Flanking_sequences | gttttccgcaaaaaaaaattctaaa | atgtcggaattttcaaaaattcaaa | |||
Mapping_target | Y54G2A | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin (7) | |||||
Affects | Gene | WBGene00021895 | |||
Transcript | Y54G2A.33.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.33.1:c.214+379A>C | ||||
Intron_number | 2/4 | ||||
Y54G2A.33.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.33.2:c.214+379A>C | ||||
Intron_number | 2/3 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw53719 | ||||
Method | WGS_Hawaiian_Waterston |