WormBase Tree Display for Variation: WBVar00187503
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| WBVar00187503 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00187503 | |||
| Other_name | haw54779 | ||||
| haw151514 | |||||
| cewivar00204353 | |||||
| Y37E11C.1b.1:c.1846-94A>T | |||||
| Y37E11C.1a.1:c.2371-94A>T | |||||
| Y37E11C.1c.1:c.1378-94A>T | |||||
| HGVSg | CHROMOSOME_IV:g.3525284A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | M57 | |
| Flanking_sequences | tattttgaaaaaaagttttcaaaaa | taaaaaaaaaatcctttcgattttt | |||
| Mapping_target | M57 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00571379 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006769 | |||
| Transcript | Y37E11C.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37E11C.1c.1:c.1378-94A>T | ||||
| Intron_number | 3/3 | ||||
| Y37E11C.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37E11C.1b.1:c.1846-94A>T | ||||
| Intron_number | 5/5 | ||||
| Y37E11C.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y37E11C.1a.1:c.2371-94A>T | ||||
| Intron_number | 9/10 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw54779 | ||||
| Method | WGS_Hawaiian_Waterston |
