WormBase Tree Display for Variation: WBVar00187521
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WBVar00187521 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00187521 | |||
Other_name | haw54797 | ||||
haw151525 | |||||
cewivar00037729 | |||||
M57.1.3:c.-924A>G | |||||
M57.1.4:c.-110A>G | |||||
M57.1.2:c.-12+231A>G | |||||
HGVSg | CHROMOSOME_IV:g.3532728A>G | ||||
Sequence_details | SMap | S_parent | Sequence | M57 | |
Flanking_sequences | ccccgctgaaaaaatgcgtattttc | ggttttcagatccccgaaaatcact | |||
Mapping_target | M57 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00571390 | |||
Status | Live | ||||
Affects | Gene | WBGene00019777 | |||
Transcript | M57.1.4 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | M57.1.4:c.-110A>G | ||||
cDNA_position | 5 | ||||
Exon_number | 1/12 | ||||
M57.1.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | M57.1.3:c.-924A>G | ||||
cDNA_position | 216 | ||||
Exon_number | 1/11 | ||||
M57.1.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | M57.1.2:c.-12+231A>G | ||||
Intron_number | 1/11 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw54797 | ||||
Method | WGS_Hawaiian_Waterston |