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WormBase Tree Display for Variation: WBVar00187524

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Name Class

WBVar00187524NamePublic_nameWBVar00187524
Other_namehaw54800
haw151528
cewivar00037735
M57.1.3:c.257+36G>A
M57.1.2:c.257+36G>A
M57.1.4:c.257+36G>A
M57.1.1:c.257+36G>A
HGVSgCHROMOSOME_IV:g.3533990G>A
Sequence_detailsSMapS_parentSequenceM57
Flanking_sequencesgtaatggtggtgagaaaaatgaggaagtgtgaccaaatattatcgtaaaa
Mapping_targetM57
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (108)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson4037
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01451758
WBVar00571393
StatusLive
AffectsGeneWBGene00019777
TranscriptM57.1.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScM57.1.1:c.257+36G>A
Intron_number3/10
M57.1.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScM57.1.4:c.257+36G>A
Intron_number4/11
M57.1.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScM57.1.3:c.257+36G>A
Intron_number3/10
M57.1.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScM57.1.2:c.257+36G>A
Intron_number4/11
ReferenceWBPaper00038208
WBPaper00040707
Remark[20081124 db] this Variation was previously named hw54800
MethodWGS_Hawaiian_Waterston