WormBase Tree Display for Variation: WBVar00187614
expand all nodes | collapse all nodes | view schema
WBVar00187614 | Name | Public_name | WBVar00187614 | ||
---|---|---|---|---|---|
Other_name | haw54890 | ||||
cewivar00038016 | |||||
ZC416.8b.1:c.-1+1672A>G | |||||
ZC416.8a.1:c.489+23A>G | |||||
HGVSg | CHROMOSOME_IV:g.3622960T>C | ||||
Sequence_details | SMap | S_parent | Sequence | ZC416 | |
Flanking_sequences | gtttgtctgcttaacactttattct | aaaaagaaagaaaaaaactaacctg | |||
Mapping_target | ZC416 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006756 | |||
WBGene00000481 | |||||
Transcript | ZC416.8a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC416.8a.1:c.489+23A>G | ||||
Intron_number | 3/5 | ||||
ZC416.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC416.8b.1:c.-1+1672A>G | ||||
Intron_number | 1/11 | ||||
Remark | [20081124 db] this Variation was previously named hw54890 | ||||
Method | WGS_Hawaiian_Waterston |