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WormBase Tree Display for Variation: WBVar00188271

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Name Class

WBVar00188271EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00188271
Other_namehaw55547
haw152072
cewivar00205347
W02C12.3i.1:c.213+249T>C
W02C12.3d.2:c.186+249T>C
W02C12.3c.1:c.366+249T>C
W02C12.3b.1:c.366+249T>C
W02C12.3e.1:c.186+249T>C
W02C12.3d.1:c.186+249T>C
W02C12.3j.1:c.213+249T>C
HGVSgCHROMOSOME_IV:g.4026629A>G
Sequence_detailsSMapS_parentSequenceF35F11
Flanking_sequencesaaaagaaccacaaaacaatttagttccggggagccctttcaggcccactt
Mapping_targetF35F11
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00571937
StatusLive
AffectsGeneWBGene00020930
TranscriptW02C12.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3e.1:c.186+249T>C
Intron_number1/9
W02C12.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3d.1:c.186+249T>C
Intron_number1/10
W02C12.3j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3j.1:c.213+249T>C
Intron_number2/9
W02C12.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3b.1:c.366+249T>C
Intron_number3/11
W02C12.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3c.1:c.366+249T>C
Intron_number3/12
W02C12.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3i.1:c.213+249T>C
Intron_number2/10
W02C12.3d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02C12.3d.2:c.186+249T>C
Intron_number2/11
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw55547
MethodWGS_Hawaiian_Waterston