WormBase Tree Display for Variation: WBVar00188740
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WBVar00188740 | Name | Public_name | WBVar00188740 | ||
---|---|---|---|---|---|
Other_name | haw56016 | ||||
cewivar00038981 | |||||
ZK185.1b.1:c.171-102A>T | |||||
ZK185.1a.1:c.663-102A>T | |||||
ZK185.1d.1:c.171-102A>T | |||||
ZK185.1c.1:c.663-102A>T | |||||
HGVSg | CHROMOSOME_IV:g.4550944A>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZK185 | |
Flanking_sequences | attgcaatttttgacagtaattttt | aaaaaaaattaattttatgaaaata | |||
Mapping_target | ZK185 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00022681 | |||
Transcript | ZK185.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK185.1b.1:c.171-102A>T | ||||
Intron_number | 2/4 | ||||
ZK185.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK185.1c.1:c.663-102A>T | ||||
Intron_number | 4/6 | ||||
ZK185.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK185.1a.1:c.663-102A>T | ||||
Intron_number | 5/7 | ||||
ZK185.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK185.1d.1:c.171-102A>T | ||||
Intron_number | 2/3 | ||||
Remark | [20081124 db] this Variation was previously named hw56016 | ||||
Method | WGS_Hawaiian_Waterston |