WormBase Tree Display for Variation: WBVar00188821
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| WBVar00188821 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00188821 | |||
| Other_name | haw56097 | ||||
| haw152498 | |||||
| cewivar00205820 | |||||
| H06H21.10c.1:c.3147+15A>T | |||||
| H06H21.10e.1:c.3252+15A>T | |||||
| H06H21.10d.1:c.3252+15A>T | |||||
| H06H21.10b.1:c.3147+15A>T | |||||
| H06H21.10a.1:c.3147+15A>T | |||||
| H06H21.10f.1:c.3252+15A>T | |||||
| HGVSg | CHROMOSOME_IV:g.4830927T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | H06H21 | |
| Flanking_sequences | aattgatttacgctaaattgaaatt | aaaaaaacccatacctgtccagtaa | |||
| Mapping_target | H06H21 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00572363 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00165948 | |||
| WBGene00019166 | |||||
| Transcript | H06H21.10f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10f.1:c.3252+15A>T | ||||
| Intron_number | 19/24 | ||||
| H06H21.10c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10c.1:c.3147+15A>T | ||||
| Intron_number | 17/19 | ||||
| H06H21.10b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10b.1:c.3147+15A>T | ||||
| Intron_number | 17/21 | ||||
| H06H21.10e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10e.1:c.3252+15A>T | ||||
| Intron_number | 19/23 | ||||
| H06H21.18 | |||||
| H06H21.10d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10d.1:c.3252+15A>T | ||||
| Intron_number | 19/21 | ||||
| H06H21.10a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10a.1:c.3147+15A>T | ||||
| Intron_number | 17/22 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw56097 | ||||
| Method | WGS_Hawaiian_Waterston |
