WormBase Tree Display for Variation: WBVar00188823
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| WBVar00188823 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00188823 | |||
| Other_name | haw56099 | ||||
| haw152499 | |||||
| cewivar00154819 | |||||
| H06H21.10b.1:c.2320+16C>A | |||||
| H06H21.10a.1:c.2320+16C>A | |||||
| H06H21.10f.1:c.2425+16C>A | |||||
| H06H21.10e.1:c.2425+16C>A | |||||
| H06H21.10d.1:c.2425+16C>A | |||||
| H06H21.10c.1:c.2320+16C>A | |||||
| HGVSg | CHROMOSOME_IV:g.4833094G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | H06H21 | |
| Flanking_sequences | aagttttaatttaaatatatactat | tgaaaaaaaacttactatccatact | |||
| Mapping_target | H06H21 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00572364 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00019166 | |||
| Transcript | H06H21.10f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10f.1:c.2425+16C>A | ||||
| Intron_number | 15/24 | ||||
| H06H21.10c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10c.1:c.2320+16C>A | ||||
| Intron_number | 13/19 | ||||
| H06H21.10b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10b.1:c.2320+16C>A | ||||
| Intron_number | 13/21 | ||||
| H06H21.10e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10e.1:c.2425+16C>A | ||||
| Intron_number | 15/23 | ||||
| H06H21.10d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10d.1:c.2425+16C>A | ||||
| Intron_number | 15/21 | ||||
| H06H21.10a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06H21.10a.1:c.2320+16C>A | ||||
| Intron_number | 13/22 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw56099 | ||||
| Method | WGS_Hawaiian_Waterston |
