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WormBase Tree Display for Variation: WBVar00189330

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Name Class

WBVar00189330EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00189330
Other_namehaw56606
haw152798
cewivar00206030
C11D2.6o.1:c.33+1354C>T
C11D2.6m.1:c.33+1354C>T
C11D2.6n.1:c.33+1354C>T
C11D2.99:n.177G>A
C11D2.6p.1:c.33+1354C>T
HGVSgCHROMOSOME_IV:g.6182471G>A
Sequence_detailsSMapS_parentSequenceC11D2
Flanking_sequencesggagaggagacagagaagagcaacgattttgtttccttttcgagagattt
Mapping_targetC11D2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00572663
StatusLive
AffectsGeneWBGene00196792
WBGene00006809
TranscriptC11D2.6o.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC11D2.6o.1:c.33+1354C>T
Intron_number1/28
C11D2.6p.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC11D2.6p.1:c.33+1354C>T
Intron_number1/28
C11D2.6n.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC11D2.6n.1:c.33+1354C>T
Intron_number1/27
C11D2.99VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScC11D2.99:n.177G>A
cDNA_position177
Exon_number1/1
C11D2.6m.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC11D2.6m.1:c.33+1354C>T
Intron_number1/29
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw56606
MethodWGS_Hawaiian_Waterston