WormBase Tree Display for Variation: WBVar00189330
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WBVar00189330 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00189330 | |||
Other_name | haw56606 | ||||
haw152798 | |||||
cewivar00206030 | |||||
C11D2.6o.1:c.33+1354C>T | |||||
C11D2.6m.1:c.33+1354C>T | |||||
C11D2.6n.1:c.33+1354C>T | |||||
C11D2.99:n.177G>A | |||||
C11D2.6p.1:c.33+1354C>T | |||||
HGVSg | CHROMOSOME_IV:g.6182471G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C11D2 | |
Flanking_sequences | ggagaggagacagagaagagcaacg | attttgtttccttttcgagagattt | |||
Mapping_target | C11D2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00572663 | |||
Status | Live | ||||
Affects | Gene | WBGene00196792 | |||
WBGene00006809 | |||||
Transcript | C11D2.6o.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6o.1:c.33+1354C>T | ||||
Intron_number | 1/28 | ||||
C11D2.6p.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6p.1:c.33+1354C>T | ||||
Intron_number | 1/28 | ||||
C11D2.6n.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6n.1:c.33+1354C>T | ||||
Intron_number | 1/27 | ||||
C11D2.99 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.99:n.177G>A | ||||
cDNA_position | 177 | ||||
Exon_number | 1/1 | ||||
C11D2.6m.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C11D2.6m.1:c.33+1354C>T | ||||
Intron_number | 1/29 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw56606 | ||||
Method | WGS_Hawaiian_Waterston |