WormBase Tree Display for Variation: WBVar00190272
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| WBVar00190272 | Name | Public_name | WBVar00190272 | ||
|---|---|---|---|---|---|
| Other_name | haw57548 | ||||
| cewivar00040401 | |||||
| R13H7.2f.1:c.*572C>T | |||||
| R13H7.2c.1:c.*558C>T | |||||
| R13H7.2g.1:c.*572C>T | |||||
| R13H7.2a.1:c.*558C>T | |||||
| R13H7.2b.1:c.*558C>T | |||||
| R13H7.2c.2:c.*558C>T | |||||
| HGVSg | CHROMOSOME_IV:g.6846264G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | R13H7 | |
| Flanking_sequences | gaaacatatggttttgagaaggtta | aattatttgaaaatgctctgaaagg | |||
| Mapping_target | R13H7 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020069 | |||
| Transcript | R13H7.2g.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2g.1:c.*572C>T | ||||
| cDNA_position | 2203 | ||||
| Exon_number | 13/13 | ||||
| R13H7.2c.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2c.1:c.*558C>T | ||||
| cDNA_position | 1941 | ||||
| Exon_number | 13/13 | ||||
| R13H7.2b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2b.1:c.*558C>T | ||||
| cDNA_position | 1875 | ||||
| Exon_number | 13/13 | ||||
| R13H7.2a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2a.1:c.*558C>T | ||||
| cDNA_position | 2019 | ||||
| Exon_number | 13/13 | ||||
| R13H7.2c.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2c.2:c.*558C>T | ||||
| cDNA_position | 2029 | ||||
| Exon_number | 13/13 | ||||
| R13H7.2f.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13H7.2f.1:c.*572C>T | ||||
| cDNA_position | 1874 | ||||
| Exon_number | 12/12 | ||||
| Remark | [20081124 db] this Variation was previously named hw57548 | ||||
| Method | WGS_Hawaiian_Waterston |
