WormBase Tree Display for Variation: WBVar00190321
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| WBVar00190321 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00190321 | |||
| Other_name | haw57597 | ||||
| haw153371 | |||||
| cewivar00040475 | |||||
| T22D1.8.1:c.-41+743A>G | |||||
| T22D1.5.1:c.*90T>C | |||||
| HGVSg | CHROMOSOME_IV:g.6905489T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | T22D1 | |
| Flanking_sequences | atcttatgtgcaattttcacaaatt | cagtattcttgtaaaatgtcaggcg | |||
| Mapping_target | T22D1 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00573236 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00020684 | |||
| WBGene00020686 | |||||
| Transcript | T22D1.5.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T22D1.5.1:c.*90T>C | ||||
| cDNA_position | 1294 | ||||
| Exon_number | 8/8 | ||||
| T22D1.8.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T22D1.8.1:c.-41+743A>G | ||||
| Intron_number | 1/11 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw57597 | ||||
| Method | WGS_Hawaiian_Waterston |
