WormBase Tree Display for Variation: WBVar00190410
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WBVar00190410 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00190410 | |||
Other_name | haw57686 | ||||
haw153428 | |||||
cewivar00207179 | |||||
R13A1.2d.1:c.65+414A>C | |||||
R13A1.2c.1:c.239+414A>C | |||||
HGVSg | CHROMOSOME_IV:g.7207885A>C | ||||
Sequence_details | SMap | S_parent | Sequence | R13A1 | |
Flanking_sequences | taggctatatgatatcaaaaatcat | aaagtgacagaatatcgttaaatga | |||
Mapping_target | R13A1 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00573293 | |||
Status | Live | ||||
Affects | Gene | WBGene00006504 | |||
Transcript | R13A1.2c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R13A1.2c.1:c.239+414A>C | ||||
Intron_number | 2/14 | ||||
R13A1.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R13A1.2d.1:c.65+414A>C | ||||
Intron_number | 1/12 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw57686 | ||||
Method | WGS_Hawaiian_Waterston |