WormBase Tree Display for Variation: WBVar00190500
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WBVar00190500 | Name | Public_name | WBVar00190500 | ||
---|---|---|---|---|---|
Other_name | uCE4-985 | ||||
haw57776 | |||||
haw153479 | |||||
cewivar00207284 | |||||
B0496.3g.1:c.-8-920A>T | |||||
B0496.3h.1:c.-8-920A>T | |||||
B0496.3e.1:c.710-920A>T | |||||
B0496.3d.1:c.-8-920A>T | |||||
B0496.3a.1:c.-8-920A>T | |||||
HGVSg | CHROMOSOME_IV:g.7428006A>T | ||||
Sequence_details | SMap | S_parent | Sequence | B0496 | |
Flanking_sequences | tgaaatgccatacaccttttttttt | aatttggccagtacggactgaaaaa | |||
Mapping_target | B0496 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00270626 | |||
WBVar00573344 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006814 | |||
Transcript | B0496.3e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3e.1:c.710-920A>T | ||||
Intron_number | 6/34 | ||||
B0496.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3h.1:c.-8-920A>T | ||||
Intron_number | 2/30 | ||||
B0496.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3d.1:c.-8-920A>T | ||||
Intron_number | 2/32 | ||||
B0496.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3g.1:c.-8-920A>T | ||||
Intron_number | 2/31 | ||||
B0496.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3a.1:c.-8-920A>T | ||||
Intron_number | 5/32 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw57776 | ||||
Method | WGS_Hawaiian_Waterston |