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WormBase Tree Display for Variation: WBVar00190502

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Name Class

WBVar00190502NamePublic_nameWBVar00190502
Other_name (11)
HGVSgCHROMOSOME_IV:g.7429598A>T
Sequence_detailsSMapS_parentSequenceB0496
Flanking_sequencescgaattatatatttctaagaaattaaaaaaaaattttcagtcaaaaagtg
Mapping_targetB0496
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006814
TranscriptB0496.3h.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3h.2:c.112+553A>T
Intron_number1/27
B0496.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3a.2:c.112+553A>T
Intron_number2/27
B0496.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3b.1:c.112+553A>T
Intron_number1/30
B0496.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3g.1:c.112+553A>T
Intron_number4/31
B0496.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3a.1:c.112+553A>T
Intron_number7/32
B0496.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3e.1:c.829+553A>T
Intron_number7/34
B0496.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3f.1:c.112+553A>T
Intron_number1/28
B0496.3h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3h.1:c.112+553A>T
Intron_number4/30
B0496.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0496.3d.1:c.112+553A>T
Intron_number4/32
Remark[20081124 db] this Variation was previously named hw57778
MethodWGS_Hawaiian_Waterston