WormBase Tree Display for Variation: WBVar00190502
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WBVar00190502 | Name | Public_name | WBVar00190502 | ||
---|---|---|---|---|---|
Other_name (11) | |||||
HGVSg | CHROMOSOME_IV:g.7429598A>T | ||||
Sequence_details | SMap | S_parent | Sequence | B0496 | |
Flanking_sequences | cgaattatatatttctaagaaatta | aaaaaaaattttcagtcaaaaagtg | |||
Mapping_target | B0496 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006814 | |||
Transcript | B0496.3h.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3h.2:c.112+553A>T | ||||
Intron_number | 1/27 | ||||
B0496.3a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3a.2:c.112+553A>T | ||||
Intron_number | 2/27 | ||||
B0496.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3b.1:c.112+553A>T | ||||
Intron_number | 1/30 | ||||
B0496.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3g.1:c.112+553A>T | ||||
Intron_number | 4/31 | ||||
B0496.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3a.1:c.112+553A>T | ||||
Intron_number | 7/32 | ||||
B0496.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3e.1:c.829+553A>T | ||||
Intron_number | 7/34 | ||||
B0496.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3f.1:c.112+553A>T | ||||
Intron_number | 1/28 | ||||
B0496.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3h.1:c.112+553A>T | ||||
Intron_number | 4/30 | ||||
B0496.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3d.1:c.112+553A>T | ||||
Intron_number | 4/32 | ||||
Remark | [20081124 db] this Variation was previously named hw57778 | ||||
Method | WGS_Hawaiian_Waterston |