WormBase Tree Display for Variation: WBVar00190506
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WBVar00190506 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00190506 | |||
Other_name (13) | |||||
HGVSg | CHROMOSOME_IV:g.7434950A>G | ||||
Sequence_details | SMap | S_parent | Sequence | B0496 | |
Flanking_sequences | ttaaaattttcgataagttgcttag | aaatgtagaaatagagatttggtat | |||
Mapping_target | B0496 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00573345 | |||
Status | Live | ||||
Affects | Gene | WBGene00006814 | |||
Transcript | B0496.3h.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3h.2:c.1454+461A>G | ||||
Intron_number | 7/27 | ||||
B0496.3a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3a.2:c.1454+461A>G | ||||
Intron_number | 8/27 | ||||
B0496.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3b.1:c.1454+461A>G | ||||
Intron_number | 7/30 | ||||
B0496.3i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3i.1:c.1505+461A>G | ||||
Intron_number | 7/29 | ||||
B0496.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3g.1:c.1454+461A>G | ||||
Intron_number | 10/31 | ||||
B0496.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3a.1:c.1454+461A>G | ||||
Intron_number | 13/32 | ||||
B0496.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3e.1:c.2171+461A>G | ||||
Intron_number | 13/34 | ||||
B0496.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3f.1:c.1454+461A>G | ||||
Intron_number | 7/28 | ||||
B0496.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3h.1:c.1454+461A>G | ||||
Intron_number | 10/30 | ||||
B0496.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0496.3d.1:c.1454+461A>G | ||||
Intron_number | 10/32 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw57782 | ||||
Method | WGS_Hawaiian_Waterston |