WormBase Tree Display for Variation: WBVar00190507
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| WBVar00190507 | Name | Public_name | WBVar00190507 | ||
|---|---|---|---|---|---|
| Other_name (13) | |||||
| HGVSg | CHROMOSOME_IV:g.7435357G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | B0496 | |
| Flanking_sequences | gaaaaataaaaatatctggtacatt | tagaatttaaagtatggaactgaac | |||
| Mapping_target | B0496 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| WBStrain00031279 | From_analysis | WGS_Andersen | |||
| WBStrain00031284 | From_analysis | WGS_Andersen | |||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01453081 | |||
| WBVar00573346 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006814 | |||
| Transcript | B0496.3h.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.2:c.1455-475G>T | ||||
| Intron_number | 7/27 | ||||
| B0496.3a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.2:c.1455-475G>T | ||||
| Intron_number | 8/27 | ||||
| B0496.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3b.1:c.1455-475G>T | ||||
| Intron_number | 7/30 | ||||
| B0496.3i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3i.1:c.1506-475G>T | ||||
| Intron_number | 7/29 | ||||
| B0496.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3g.1:c.1455-475G>T | ||||
| Intron_number | 10/31 | ||||
| B0496.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.1:c.1455-475G>T | ||||
| Intron_number | 13/32 | ||||
| B0496.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3e.1:c.2172-475G>T | ||||
| Intron_number | 13/34 | ||||
| B0496.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3f.1:c.1455-475G>T | ||||
| Intron_number | 7/28 | ||||
| B0496.3h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.1:c.1455-475G>T | ||||
| Intron_number | 10/30 | ||||
| B0496.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3d.1:c.1455-475G>T | ||||
| Intron_number | 10/32 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| Remark | [20081124 db] this Variation was previously named hw57783 | ||||
| Method | WGS_Hawaiian_Waterston |
