WormBase Tree Display for Variation: WBVar00190509

WBVar00190509 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00190509
    Other_name (13)
    HGVSg: CHROMOSOME_IV:g.7437659A>T
  Sequence_details: SMap: S_parent: Sequence: B0496
    Flanking_sequences: atgaaaatagttgaaatgaatatta tttaagatacgttggcagtgtacca
    Mapping_target: B0496
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00022899 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00573347
    Status: Live
  Affects: Gene: WBGene00006814
    Transcript: B0496.3h.2 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3h.2:c.2580-7A>T
        Intron_number: 12/27
      B0496.3a.2 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3a.2:c.2457-7A>T
        Intron_number: 12/27
      B0496.3b.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3b.1:c.2580-7A>T
        Intron_number: 12/30
      B0496.3i.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3i.1:c.2631-7A>T
        Intron_number: 12/29
      B0496.3g.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3g.1:c.2580-7A>T
        Intron_number: 15/31
      B0496.3a.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3a.1:c.2457-7A>T
        Intron_number: 17/32
      B0496.3e.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3e.1:c.3297-7A>T
        Intron_number: 18/34
      B0496.3f.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3f.1:c.2580-7A>T
        Intron_number: 12/28
      B0496.3h.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3h.1:c.2580-7A>T
        Intron_number: 15/30
      B0496.3d.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: B0496.3d.1:c.2580-7A>T
        Intron_number: 15/32
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw57785
  Method: WGS_Hawaiian_Waterston