WormBase Tree Display for Variation: WBVar00190636

WBVar00190636 Name: Public_name: WBVar00190636
    Other_name (11)
    HGVSg: CHROMOSOME_IV:g.7468074C>T
  Sequence_details: SMap: S_parent: Sequence: F55G1
    Flanking_sequences: taaatcgatcaggaatttctgcatt gatggtccggctccactattgcttg
    Mapping_target: F55G1
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00022868 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022899 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00018903
    Transcript: F55G1.7c.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F55G1.7c.2:c.264G>A
        HGVSp: CE46321:p.Ser88=
        cDNA_position: 312
        CDS_position: 264
        Protein_position: 88
        Exon_number: 3/7
        Codon_change: tcG/tcA
        Amino_acid_change: S
      F55G1.7b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F55G1.7b.1:c.270G>A
        HGVSp: CE46396:p.Ser90=
        cDNA_position: 278
        CDS_position: 270
        Protein_position: 90
        Exon_number: 3/7
        Codon_change: tcG/tcA
        Amino_acid_change: S
      F55G1.7d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F55G1.7d.1:c.396G>A
        HGVSp: CE49495:p.Ser132=
        cDNA_position: 396
        CDS_position: 396
        Protein_position: 132
        Exon_number: 3/6
        Codon_change: tcG/tcA
        Amino_acid_change: S
      F55G1.7c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F55G1.7c.1:c.264G>A
        HGVSp: CE46321:p.Ser88=
        cDNA_position: 387
        CDS_position: 264
        Protein_position: 88
        Exon_number: 4/8
        Codon_change: tcG/tcA
        Amino_acid_change: S
      F55G1.7a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F55G1.7a.1:c.402G>A
        HGVSp: CE44207:p.Ser134=
        cDNA_position: 402
        CDS_position: 402
        Protein_position: 134
        Exon_number: 3/7
        Codon_change: tcG/tcA
        Amino_acid_change: S
  Remark: [20081124 db] this Variation was previously named hw57912
  Method: WGS_Hawaiian_Waterston