Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00190709

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00190709EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00190709
Other_namesnp_R05G6[8]
haw57985
cewivar00207565
R05G6.10d.1:c.177+1967A>C
R05G6.10c.1:c.222+1967A>C
R05G6.10e.1:c.48+1967A>C
HGVSgCHROMOSOME_IV:g.7526623T>G
Sequence_detailsSMapS_parentSequenceR05G6
Flanking_sequencestaaaaattgtataagatcaaacacttcctatattttttcaacttgtttta
Mapping_targetR05G6
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00245812
StatusLive
AffectsGeneWBGene00019902
TranscriptR05G6.10e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05G6.10e.1:c.48+1967A>C
Intron_number1/9
R05G6.10c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05G6.10c.1:c.222+1967A>C
Intron_number3/12
R05G6.10d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05G6.10d.1:c.177+1967A>C
Intron_number2/10
ReferenceWBPaper00004703
Remark[20081124 db] this Variation was previously named hw57985
MethodWGS_Hawaiian_Waterston