WormBase Tree Display for Variation: WBVar00190775
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WBVar00190775 | Name | Public_name | WBVar00190775 | ||
---|---|---|---|---|---|
Other_name | snp_F45E4[4] | ||||
haw58051 | |||||
haw153620 | |||||
cewivar00207648 | |||||
F45E4.7c.1:c.314+187G>C | |||||
F45E4.7a.1:c.566+187G>C | |||||
HGVSg | CHROMOSOME_IV:g.7639702C>G | ||||
Sequence_details | SMap | S_parent | Sequence | F45E4 | |
Flanking_sequences | tgtagtttttaatttacgcaataac | cttttctccactagtgaagactaat | |||
Mapping_target | F45E4 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00573485 | |||
WBVar00244825 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018472 | |||
Transcript | F45E4.7c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F45E4.7c.1:c.314+187G>C | ||||
Intron_number | 3/13 | ||||
F45E4.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45E4.7a.1:c.566+187G>C | ||||
Intron_number | 5/16 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw58051 | ||||
Method | WGS_Hawaiian_Waterston |