WormBase Tree Display for Variation: WBVar00191203
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WBVar00191203 | Name | Public_name | WBVar00191203 | ||
---|---|---|---|---|---|
Other_name | haw58479 | ||||
cewivar00208138 | |||||
F20C5.1h.1:c.487-322T>C | |||||
F20C5.1d.1:c.487-322T>C | |||||
F20C5.1b.1:c.487-313T>C | |||||
F20C5.1f.1:c.487-313T>C | |||||
F20C5.1g.1:c.487-322T>C | |||||
F20C5.1i.1:c.487-313T>C | |||||
F20C5.1a.1:c.487-322T>C | |||||
F20C5.1c.1:c.18+35T>C | |||||
HGVSg | CHROMOSOME_IV:g.8747453T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F20C5 | |
Flanking_sequences | gttttgttttcagcttatcacttca | caaacggaaggaaaggttgattaag | |||
Mapping_target | F20C5 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004051 | |||
Transcript | F20C5.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1a.1:c.487-322T>C | ||||
Intron_number | 3/15 | ||||
F20C5.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1f.1:c.487-313T>C | ||||
Intron_number | 3/15 | ||||
F20C5.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1d.1:c.487-322T>C | ||||
Intron_number | 2/11 | ||||
F20C5.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1c.1:c.18+35T>C | ||||
Intron_number | 1/12 | ||||
F20C5.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1b.1:c.487-313T>C | ||||
Intron_number | 3/14 | ||||
F20C5.1g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1g.1:c.487-322T>C | ||||
Intron_number | 3/14 | ||||
F20C5.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1i.1:c.487-313T>C | ||||
Intron_number | 3/15 | ||||
F20C5.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F20C5.1h.1:c.487-322T>C | ||||
Intron_number | 3/15 | ||||
Remark | [20081124 db] this Variation was previously named hw58479 | ||||
Method | WGS_Hawaiian_Waterston |