WormBase Tree Display for Variation: WBVar00191585
expand all nodes | collapse all nodes | view schema
WBVar00191585 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00191585 | |||
Other_name | haw58861 | ||||
haw154127 | |||||
cewivar00208576 | |||||
W08D2.1.3:c.404-7T>C | |||||
W08D2.1.2:c.404-7T>C | |||||
W08D2.1.1:c.404-7T>C | |||||
HGVSg | CHROMOSOME_IV:g.9814567A>G | ||||
Sequence_details | SMap | S_parent | Sequence | W08D2 | |
Flanking_sequences | aatgctgcttctttgtttgctgaag | atatatttaggatatatatttcaat | |||
Mapping_target | W08D2 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00573992 | |||
Status | Live | ||||
Affects | Gene | WBGene00001188 | |||
Transcript | W08D2.1.3 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | W08D2.1.3:c.404-7T>C | ||||
Intron_number | 5/12 | ||||
W08D2.1.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | W08D2.1.1:c.404-7T>C | ||||
Intron_number | 5/12 | ||||
W08D2.1.2 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | W08D2.1.2:c.404-7T>C | ||||
Intron_number | 5/11 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw58861 | ||||
Method | WGS_Hawaiian_Waterston |