WormBase Tree Display for Variation: WBVar00191626
expand all nodes | collapse all nodes | view schema
WBVar00191626 | Name | Public_name | WBVar00191626 | ||
---|---|---|---|---|---|
Other_name | haw58902 | ||||
cewivar00208628 | |||||
CE49810:p.Lys31= | |||||
C47E12.3a.1:c.93G>A | |||||
CE33766:p.Lys31= | |||||
C47E12.3b.1:c.93G>A | |||||
HGVSg | CHROMOSOME_IV:g.10001674C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C47E12 | |
Flanking_sequences | aaattgacgcatattttatttcctc | ttcgttaaaagaaatggatttttcg | |||
Mapping_target | C47E12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008148 | |||
Transcript | C47E12.3a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C47E12.3a.1:c.93G>A | ||||
HGVSp | CE33766:p.Lys31= | ||||
cDNA_position | 125 | ||||
CDS_position | 93 | ||||
Protein_position | 31 | ||||
Exon_number | 3/10 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
C47E12.3b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C47E12.3b.1:c.93G>A | ||||
HGVSp | CE49810:p.Lys31= | ||||
cDNA_position | 127 | ||||
CDS_position | 93 | ||||
Protein_position | 31 | ||||
Exon_number | 3/10 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Remark | [20081124 db] this Variation was previously named hw58902 | ||||
Method | WGS_Hawaiian_Waterston |