WormBase Tree Display for Variation: WBVar00192208
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WBVar00192208 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00192208 | |||
Other_name | haw59484 | ||||
haw154537 | |||||
cewivar00209312 | |||||
C29E6.2a.1:c.1654+1592C>T | |||||
C29E6.2b.1:c.1651+1592C>T | |||||
HGVSg | CHROMOSOME_IV:g.11868913C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C29E6 | |
Flanking_sequences | cctcccatcaattataggctttgag | gagaaaaagattttggacaaccgtg | |||
Mapping_target | C29E6 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00574402 | |||
Status | Live | ||||
Affects | Gene | WBGene00007801 | |||
Transcript | C29E6.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C29E6.2a.1:c.1654+1592C>T | ||||
Intron_number | 6/12 | ||||
C29E6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29E6.2b.1:c.1651+1592C>T | ||||
Intron_number | 6/12 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw59484 | ||||
Method | WGS_Hawaiian_Waterston |