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WormBase Tree Display for Variation: WBVar00192679

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Name Class

WBVar00192679EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00192679
Other_namehaw59955
haw154877
cewivar00156282
F07C6.4h.1:c.589-4707C>T
F07C6.4g.1:c.589-4707C>T
F07C6.4c.2:c.-141-4707C>T
F07C6.4f.1:c.1078-4707C>T
F07C6.4b.1:c.63+895C>T
F07C6.4e.1:c.1078-4707C>T
F07C6.4d.1:c.1078-4707C>T
HGVSgCHROMOSOME_IV:g.12818326C>T
Sequence_detailsSMapS_parentSequenceF07C6
Flanking_sequencesacaagtttttagttttttaaatcgttttcacaaatgtattaaaatttctg
Mapping_targetF07C6
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (14)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00574742
StatusLive
AffectsGeneWBGene00008555
TranscriptF07C6.4c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4c.2:c.-141-4707C>T
Intron_number9/19
F07C6.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4h.1:c.589-4707C>T
Intron_number4/11
F07C6.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4g.1:c.589-4707C>T
Intron_number4/12
F07C6.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4e.1:c.1078-4707C>T
Intron_number10/16
F07C6.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4f.1:c.1078-4707C>T
Intron_number10/18
F07C6.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4d.1:c.1078-4707C>T
Intron_number10/18
F07C6.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF07C6.4b.1:c.63+895C>T
Intron_number2/11
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw59955
MethodWGS_Hawaiian_Waterston