WormBase Tree Display for Variation: WBVar00192679
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WBVar00192679 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00192679 | |||
Other_name | haw59955 | ||||
haw154877 | |||||
cewivar00156282 | |||||
F07C6.4h.1:c.589-4707C>T | |||||
F07C6.4g.1:c.589-4707C>T | |||||
F07C6.4c.2:c.-141-4707C>T | |||||
F07C6.4f.1:c.1078-4707C>T | |||||
F07C6.4b.1:c.63+895C>T | |||||
F07C6.4e.1:c.1078-4707C>T | |||||
F07C6.4d.1:c.1078-4707C>T | |||||
HGVSg | CHROMOSOME_IV:g.12818326C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F07C6 | |
Flanking_sequences | acaagtttttagttttttaaatcgt | tttcacaaatgtattaaaatttctg | |||
Mapping_target | F07C6 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (14) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00574742 | |||
Status | Live | ||||
Affects | Gene | WBGene00008555 | |||
Transcript | F07C6.4c.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4c.2:c.-141-4707C>T | ||||
Intron_number | 9/19 | ||||
F07C6.4h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4h.1:c.589-4707C>T | ||||
Intron_number | 4/11 | ||||
F07C6.4g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4g.1:c.589-4707C>T | ||||
Intron_number | 4/12 | ||||
F07C6.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4e.1:c.1078-4707C>T | ||||
Intron_number | 10/16 | ||||
F07C6.4f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4f.1:c.1078-4707C>T | ||||
Intron_number | 10/18 | ||||
F07C6.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4d.1:c.1078-4707C>T | ||||
Intron_number | 10/18 | ||||
F07C6.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F07C6.4b.1:c.63+895C>T | ||||
Intron_number | 2/11 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw59955 | ||||
Method | WGS_Hawaiian_Waterston |