WormBase Tree Display for Variation: WBVar00193021

WBVar00193021 Name: Public_name: WBVar00193021
    Other_name: snp_T13E8[2]
      haw60297
      haw155105
      cewivar00125125
      F49E11.1b.1:c.557-3805G>C
      F49E11.1k.1:c.506-3805G>C
      F49E11.1g.1:c.506-3805G>C
      F49E11.1c.1:c.557-3805G>C
    HGVSg: CHROMOSOME_IV:g.13020029G>C
  Sequence_details: SMap: S_parent: Sequence: T13E8
    Flanking_sequences: acagaaagaattgaaggaaaaacag gaaatataattctttacggtcgagg
    Mapping_target: T13E8
    Type_of_mutation: Substitution: G C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (14)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00574970
        WBVar00246236
    Status: Live
  Affects: Gene: WBGene00003150
    Transcript: F49E11.1k.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F49E11.1k.1:c.506-3805G>C
        Intron_number: 5/12
      F49E11.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F49E11.1g.1:c.506-3805G>C
        Intron_number: 5/11
      F49E11.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F49E11.1c.1:c.557-3805G>C
        Intron_number: 4/11
      F49E11.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F49E11.1b.1:c.557-3805G>C
        Intron_number: 4/12
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw60297
  Method: WGS_Hawaiian_Waterston