WormBase Tree Display for Variation: WBVar00193265
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| WBVar00193265 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00193265 | |||
| Other_name | haw60541 | ||||
| haw155284 | |||||
| cewivar00210243 | |||||
| CE42707:p.Leu508= | |||||
| JC8.10b.1:c.1516+8A>T | |||||
| JC8.10a.1:c.1499-137A>T | |||||
| JC8.10d.1:c.1524A>T | |||||
| HGVSg | CHROMOSOME_IV:g.13266120T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y67H2A | |
| Flanking_sequences | aataatacaaatttcacgacattta | agcttaccatgatagtaatagcttt | |||
| Mapping_target | Y67H2A | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00575149 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006763 | |||
| Transcript | JC8.10b.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | JC8.10b.1:c.1516+8A>T | ||||
| Intron_number | 7/11 | ||||
| JC8.10d.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | JC8.10d.1:c.1524A>T | ||||
| HGVSp | CE42707:p.Leu508= | ||||
| cDNA_position | 1524 | ||||
| CDS_position | 1524 | ||||
| Protein_position | 508 | ||||
| Exon_number | 6/7 | ||||
| Codon_change | ctA/ctT | ||||
| Amino_acid_change | L | ||||
| JC8.10a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | JC8.10a.1:c.1499-137A>T | ||||
| Intron_number | 6/10 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw60541 | ||||
| Method | WGS_Hawaiian_Waterston |
