WormBase Tree Display for Variation: WBVar00193418
expand all nodes | collapse all nodes | view schema
WBVar00193418 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00193418 | |||
Other_name | haw60694 | ||||
haw155373 | |||||
cewivar00210450 | |||||
Y62E10A.13h.1:c.*213A>G | |||||
Y62E10A.13b.1:c.*213A>G | |||||
Y62E10A.13c.1:c.*213A>G | |||||
Y62E10A.13c.2:c.*213A>G | |||||
Y62E10A.13a.1:c.*213A>G | |||||
HGVSg | CHROMOSOME_IV:g.13389150T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y62E10A | |
Flanking_sequences | gaatatttttcggaactctatatca | gtggtagaagatttatggcacaaca | |||
Mapping_target | Y62E10A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00575238 | |||
Status | Live | ||||
Affects | Gene | WBGene00013379 | |||
Transcript | Y62E10A.13c.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13c.1:c.*213A>G | ||||
cDNA_position | 1170 | ||||
Exon_number | 6/6 | ||||
Y62E10A.13c.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13c.2:c.*213A>G | ||||
cDNA_position | 1137 | ||||
Exon_number | 6/6 | ||||
Y62E10A.13a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13a.1:c.*213A>G | ||||
cDNA_position | 1339 | ||||
Exon_number | 6/6 | ||||
Y62E10A.13h.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13h.1:c.*213A>G | ||||
cDNA_position | 1006 | ||||
Exon_number | 5/5 | ||||
Y62E10A.13b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y62E10A.13b.1:c.*213A>G | ||||
cDNA_position | 1147 | ||||
Exon_number | 6/6 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw60694 | ||||
Method | WGS_Hawaiian_Waterston |