WormBase Tree Display for Variation: WBVar00193536

WBVar00193536 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00193536
    Other_name (17)
    HGVSg: CHROMOSOME_IV:g.13479774T>C
  Sequence_details: SMap: S_parent: Sequence: Y38H8A
    Flanking_sequences: cgtcagaagctcgttcttccatgtt gcatggatcattacagcgctggaag
    Mapping_target: Y38H8A
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022899 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00024204 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00575333
    Status: Live
  Affects: Gene: WBGene00012868
    Transcript: Y45F10A.6g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6g.1:c.3051A>G
        HGVSp: CE49936:p.Ala1017=
        cDNA_position: 3062
        CDS_position: 3051
        Protein_position: 1017
        Exon_number: 16/20
        Codon_change: gcA/gcG
        Amino_acid_change: A
      Y45F10A.6d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6d.1:c.2484A>G
        HGVSp: CE47910:p.Ala828=
        cDNA_position: 2484
        CDS_position: 2484
        Protein_position: 828
        Exon_number: 11/14
        Codon_change: gcA/gcG
        Amino_acid_change: A
      Y45F10A.6f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6f.1:c.2484A>G
        HGVSp: CE47998:p.Ala828=
        cDNA_position: 2484
        CDS_position: 2484
        Protein_position: 828
        Exon_number: 11/14
        Codon_change: gcA/gcG
        Amino_acid_change: A
      Y45F10A.6e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6e.1:c.2484A>G
        HGVSp: CE47946:p.Ala828=
        cDNA_position: 2484
        CDS_position: 2484
        Protein_position: 828
        Exon_number: 11/14
        Codon_change: gcA/gcG
        Amino_acid_change: A
      Y45F10A.6c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6c.1:c.3051A>G
        HGVSp: CE41048:p.Ala1017=
        cDNA_position: 3062
        CDS_position: 3051
        Protein_position: 1017
        Exon_number: 16/20
        Codon_change: gcA/gcG
        Amino_acid_change: A
      Y45F10A.6a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6a.1:c.3051A>G
        HGVSp: CE40583:p.Ala1017=
        cDNA_position: 3062
        CDS_position: 3051
        Protein_position: 1017
        Exon_number: 16/20
        Codon_change: gcA/gcG
        Amino_acid_change: A
      Y45F10A.6b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y45F10A.6b.1:c.3051A>G
        HGVSp: CE40584:p.Ala1017=
        cDNA_position: 3056
        CDS_position: 3051
        Protein_position: 1017
        Exon_number: 16/20
        Codon_change: gcA/gcG
        Amino_acid_change: A
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw60812
  Method: WGS_Hawaiian_Waterston